Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905866.1_cds_XP_016456134.1_50000
CDS Infomation

[gene=LOC107780127] [db_xref=GeneID:107780127] [protein=polyphenol oxidase E, chloroplastic] [protein_id=XP_016456134.1] [location=complement(103665..105431)] [gbkey=CDS]
Sequence

ATGGCTTCTTCTTCTTCTTCTACTCTACCTTTATGCGCCAATAAAACTCCCTCTTCTTCC
TTCACCAACACCAACTCATCTTTCTTTGCAAAACCCTCTCAGCTTTTCCTTCATGGAAAA
CGTAACCAAAATTTCAAGTTCTCATGCAATGCCAACAGTGACAAAAACAACCTTGAAGCT
GTTGACAGGAGGAATGTACTCTTGGGTTTAGGAGGGCTGTATGGCGCAGCTAATCTTGCG
CCATTAGCTACTGCTGCTCCTATACCACCTCCTGATCTCAAATCTTGTAGCAAAGCCCAT
ATAAATGACAAAACGGAGGTTTCATACAGTTGTTGTCCCCCTATCCCAAGTGATATGGAC
AGCGTTCCATATTACAAGTTTCCTTCTATGCCCAAACTCCGTATTCGGCCCGCTGCTCAT
GCTGCTGATGAGGAGTACATTGCTAAATACCAGTTAGCCACTAGTCGAATGAGGGAACTT
GACAAAGACCCATTTGACCCTCTTGGCTTCAAGCAACAAGCCAATATCCATTGTGCTTAT
TGCAACGGTGCTTACAAAATTGGTGGCAAAGAGTTACAAGTCCATTTCTCGTGGCTTTTT
TTCCCTTTTCATAGATGGTACTTGTACTTCTATGAAAGAATCTTGGGCTCTTTAATTAAT
GATCCTACTTTTGGTTTGCCATATTGGAACTGGGACCATCCAAAGGGCATGCGTATACCT
CCCATGTTCGATCGTGAAGGGTCTTCCCTTTACGACGAAAAACGTAACCAAAGTCACCGT
AATGGAACCATAATTGATCTTGGTCATTTCGGTCAAGAAGTCCAAACAACTCAACTGCAG
CAGATGACTAATAACTTAACTATAATGTATCGTCAAATGATAACTAATGCTCCTTGCCCC
TTGCTCTTCTTTGGTCAGCCTTACCCTCTAGGAACTGATCCCAGTCCAGGGATGGGCACT
ATTGAAAACATCCCTCATACTCCTGTCCACATTTGGGTTGGTAGTAGGCTTGATGAGAAT
AATACGAAACACGGTGAGGATATGGGTAATTTTTACTCGGCCGGTTTAGACCCGCTTTTC
TATTCCCATCACGCCAATGTGGACCGGATGTGGTCCGAGTGGAAAGCCATAGGAGGGAAA
AGAAGGGATCTCACGCACAAAGATTGGTTGAACTCCGAGTTCTTTTTCTACGATGAAAAC
CGCAACCCGTTCCGTGTGAAAGTCCGTGACTGTTTGGACAGTAAGAAAATGGGCTTTGAT
TACGCACCGATGCCAACCCCATGGCGCAATTTTAAGCCAATAAGAAAGAGCAATGCAGGG
AAGGTGAATCTAAGTTCAGTTCCGCCAGCAAGCAGGGTGTTCCCACTCTCAAAGCTGGAC
AGAGCCATTTCATTTTCCATCGATAGGCCGTCTTCGTCAAGGACTCAACAGGAGAAAAAT
GAACAAGAGGAGATGCTAACGTTCAACAACATTAAGTATGACGATAGTAAGTATATAAGG
TTCGATGTGTTCCTTAACGTGGACAAGACAGTGAATGCGGACGAGCTTGACAAGGCAGAA
TATGCGGGGAGTTACACCAGCTTGCCACATGTTCATGGAGATAATGTGTCTCATGTTACG
TCTGTTACTTTCCAGTTGGCCATCACTGAACTGTTGGAGGATATTGGGTTGGAAGATGAA
GACACTATTGCGGTAACTGTGGTTCCAAAGAAAGGTGGCGAAGAGATCTCCATTGAAGCT
GTTGAGATTAAGCTTGTCAATTGTTAA

Peptide Sequence

PEP ID

XP_016456134.1
PEP Infomation

PREDICTED: polyphenol oxidase E, chloroplastic [Nicotiana tabacum]
Sequence

MASSSSSTLPLCANKTPSSSFTNTNSSFFAKPSQLFLHGKRNQNFKFSCNANSDKNNLEA
VDRRNVLLGLGGLYGAANLAPLATAAPIPPPDLKSCSKAHINDKTEVSYSCCPPIPSDMD
SVPYYKFPSMPKLRIRPAAHAADEEYIAKYQLATSRMRELDKDPFDPLGFKQQANIHCAY
CNGAYKIGGKELQVHFSWLFFPFHRWYLYFYERILGSLINDPTFGLPYWNWDHPKGMRIP
PMFDREGSSLYDEKRNQSHRNGTIIDLGHFGQEVQTTQLQQMTNNLTIMYRQMITNAPCP
LLFFGQPYPLGTDPSPGMGTIENIPHTPVHIWVGSRLDENNTKHGEDMGNFYSAGLDPLF
YSHHANVDRMWSEWKAIGGKRRDLTHKDWLNSEFFFYDENRNPFRVKVRDCLDSKKMGFD
YAPMPTPWRNFKPIRKSNAGKVNLSSVPPASRVFPLSKLDRAISFSIDRPSSSRTQQEKN
EQEEMLTFNNIKYDDSKYIRFDVFLNVDKTVNADELDKAEYAGSYTSLPHVHGDNVSHVT
SVTFQLAITELLEDIGLEDEDTIAVTVVPKKGGEEISIEAVEIKLVNC

Transcript Sequence

Gene sequence data has not been registered.